Principles of biological computation: from circadian clock to evolution

For the final — third — day of the Santa Fe Institute workshop on “What is Biological Computation?” (11 – 13 September) organized by Albert Kao, Jessica Flack, and David Wolpert, we opened the floor to short impormptu talks from all the participants. The result was 21 presentations organized in 4 sessions. As with my posts on the previous two days of this workshop (Day 1: Elements of biological computation & stochastic thermodynamics of life;…

Continue reading


Revival of dead pig brains raises moral questions about life and death

The line between life and death may not be what we thought it was according to some research that was reported in April 2019. Ed Wong’s April 17, 2019 article (behind a paywall) for The Atlantic was my first inkling about the life-death questions raised by some research performed at Yale University, (Note: Links have been removed) The brain, supposedly, cannot long survive without blood. Within seconds, oxygen supplies deplete, electrical activity fades, and unconsciousness…

Continue reading


October 2019 science and art/science events in Vancouver and other parts of Canada

This is a scattering of events, which I’m sure will be augmented as we properly start the month of October 2019. October 2, 2019 in Waterloo, Canada (Perimeter Institute) If you want to be close enough to press the sacred flesh (Sir Martin Rees), you’re out of luck. However, there are still options ranging from watching a live webcast from the comfort of your home to watching the lecture via closed circuit television with other…

Continue reading


Mushroom compost as a biobased nanocarrier for curing plant diseases

Scientists in Europe have just cured a plant disease Esca (fungi that destroy grapevines) for the first time ever. A May 22, 2019 news item on Nanowerk announces the research success, Plant diseases, though a normal part of nature, can have disastrous effects in agriculture. They reduce food for people and revenues in rural areas. In the worst cases they result in hunger and starvation, as many famines in history show. About 16% of all…

Continue reading


Ghosts, mechanical turks, and pseudo-AI (artificial intelligence)—Is it all a con game?

There’s been more than one artificial intelligence (AI) story featured here on this blog but the ones featured in this posting are the first I’ve stumbled across that suggest the hype is even more exaggerated than even the most cynical might have thought. (BTW, the 2019 material is later as I have taken a chronological approach to this posting.) It seems a lot of companies touting their AI algorithms and capabilities are relying on human…

Continue reading


AI (artificial intelligence) and a hummingbird robot

Every once in a while I stumble across a hummingbird robot story (my August 12, 2011 posting and my August 1, 2014 posting). Here’s what the hummingbird robot looks like now (hint: there’s a significant reduction in size), Caption: Purdue University researchers are building robotic hummingbirds that learn from computer simulations how to fly like a real hummingbird does. The robot is encased in a decorative shell. Credit: Purdue University photo/Jared Pike I think this…

Continue reading


The science and engineering of biological computation: from process to software to DNA-based neural networks

In the earlier days of TheEGG, I used to write extensively about the themes of some of the smaller conferences and workshops that I attended. One of the first such workshops I blogged about in detail was the 2nd workshop on Natural Algorithms and the Sciences in May 2013. That spawned an eight post series that I closed with a vision for a path toward an algorithmic theory of biology. In the six years since,…

Continue reading


Detecting off-target effects of CRISPR gene-editing

In amidst all the hyperbole about CRISPR (clustered regularly interspaced short palindromic repeats), the gene editing technology, you will sometimes find a mild cautionary note. It seems that CRISPR is not as precise as you might think. Some months ago there was a story about research into detecting possible unanticipated (off target) effects from using CRISPR, from an April 19, 2019 news item on ScienceDaily, Since the CRISPR genome editing technology was invented in 2012,…

Continue reading


Colo(u)r-changing building surfaces thanks to gold nanoparticles

Gold, at the nanoscale, has different properties than it has at the macroscale and research at the University of Cambridge has found a new way to exploit gold’s unique properties at the nanoscale according to a May 13, 2019 news item item on ScienceDaily, The smallest pixels yet created — a million times smaller than those in smartphones, made by trapping particles of light under tiny rocks of gold — could be used for new…

Continue reading


Electronics begone! Enter: the light-based brainlike computing chip

At this point, it’s possible I’m wrong but I think this is the first ‘memristor’ type device (also called a neuromorphic chip) based on light rather than electronics that I’ve featured here on this blog. In other words, it’s not, technically speaking, a memristor but it does have the same properties so it is a neuromorphic chip. Caption: The optical microchips that the researchers are working on developing are about the size of a one-cent…

Continue reading